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MacVector inc dna software primer analysis program
Dna Software Primer Analysis Program, supplied by MacVector inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/program+dna*+analysis+software/dna+software+primer+analysis+program/pmc02670544-70-12-11
Average 90 stars, based on 1 article reviews
dna software primer analysis program - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Leishmania donovani P23 protects parasites against HSP90 inhibitor-mediated growth arrest
Article Snippet: In silico procedures DNA and protein sequence analysis was performed using the MacVector® software suite, version 13.x (MacVector Inc, Cary NC, USA).

Article Title: Leishmania donovani P23 protects parasites against HSP90 inhibitor-mediated growth arrest
Article Snippet: DNA and protein sequence analysis was performed using the MacVector® software suite, version 13.x (MacVector Inc, Cary NC, USA).

Sequencing:

Article Title: Molecular identification of erythrocytic necrosis virus (ENV) from the blood of Pacific herring (Clupea pallasii).
Article Snippet: Viral erythrocytic necrosis (VEN) is a condition affecting the red blood cells of more than 20 species of marine and anadromous fishes in the North Atlantic and North Pacific Oceans.. Among populations of Pacific herring (Clupea pallasii) on the west coast of North America the disease causes anemia and elevated mortality in periodic epizootics.. Presently, VEN is diagnosed by observation of typical cytoplasmic inclusion bodies in stained blood smears from infected fish.

Article Title: Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins)
Article Snippet: .. Relative abundance values were adjusted to account for contig size and total library reads using the following equation: e y = ( n y N x L 1x / n x N y L y ) × e x , where e x and e y represent normalized relative abundance levels of AAS transcript in libraries X and Y, N x and N y represent the total number of reads in libraries X and Y, n x and n y represent the number of reads related to the specific AAS transcript in libraries X and Y, and L x and L y represent the length of the contig related to the specific AAS transcript in libraries X and Y. Phylogeny and comparative sequence analysis among AAS sequences To determine relationships between AAS sequences, a guide phylogeny tree was constructed using the neighbor-joining method in MacVector vers 12 DNA analysis software (MacVector Inc., Cary, North Carolina). ..

Article Title: Short and long-read whole genome sequencing explains most undiagnosed Autosomal Dominant Polycystic Kidney Disease
Article Snippet: .. Sanger sequence chromatograms were analysed using MacVector DNA sequence analysis software (MacVector Inc.). ..

Software:

Article Title: Molecular identification of erythrocytic necrosis virus (ENV) from the blood of Pacific herring (Clupea pallasii).
Article Snippet: Viral erythrocytic necrosis (VEN) is a condition affecting the red blood cells of more than 20 species of marine and anadromous fishes in the North Atlantic and North Pacific Oceans.. Among populations of Pacific herring (Clupea pallasii) on the west coast of North America the disease causes anemia and elevated mortality in periodic epizootics.. Presently, VEN is diagnosed by observation of typical cytoplasmic inclusion bodies in stained blood smears from infected fish.

Article Title: Interaction of Copper Toxicity and Oxidative Stress in Campylobacter jejuni
Article Snippet: .. Oligonucleotide primers (see Table S3 in the supplemental material) were designed by the DNA analysis software MacVector using the sequenced NCTC 11168 ( 36 ). .. PCR amplifications were performed with EconoTaq Plus 2X master mix (Lucigen Corporation, Middleton, WI), using genomic DNA as the template.

Article Title: Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins)
Article Snippet: .. Relative abundance values were adjusted to account for contig size and total library reads using the following equation: e y = ( n y N x L 1x / n x N y L y ) × e x , where e x and e y represent normalized relative abundance levels of AAS transcript in libraries X and Y, N x and N y represent the total number of reads in libraries X and Y, n x and n y represent the number of reads related to the specific AAS transcript in libraries X and Y, and L x and L y represent the length of the contig related to the specific AAS transcript in libraries X and Y. Phylogeny and comparative sequence analysis among AAS sequences To determine relationships between AAS sequences, a guide phylogeny tree was constructed using the neighbor-joining method in MacVector vers 12 DNA analysis software (MacVector Inc., Cary, North Carolina). ..

Article Title: Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins)
Article Snippet: .. To determine relationships between AAS sequences, a guide phylogeny tree was constructed using the neighbor-joining method in MacVector vers 12 DNA analysis software (MacVector Inc., Cary, North Carolina). ..

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.

Article Title: Short and long-read whole genome sequencing explains most undiagnosed Autosomal Dominant Polycystic Kidney Disease
Article Snippet: .. Sanger sequence chromatograms were analysed using MacVector DNA sequence analysis software (MacVector Inc.). ..

Atomic Absorption Spectroscopy:

Article Title: Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins)
Article Snippet: .. Relative abundance values were adjusted to account for contig size and total library reads using the following equation: e y = ( n y N x L 1x / n x N y L y ) × e x , where e x and e y represent normalized relative abundance levels of AAS transcript in libraries X and Y, N x and N y represent the total number of reads in libraries X and Y, n x and n y represent the number of reads related to the specific AAS transcript in libraries X and Y, and L x and L y represent the length of the contig related to the specific AAS transcript in libraries X and Y. Phylogeny and comparative sequence analysis among AAS sequences To determine relationships between AAS sequences, a guide phylogeny tree was constructed using the neighbor-joining method in MacVector vers 12 DNA analysis software (MacVector Inc., Cary, North Carolina). ..

Article Title: Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins)
Article Snippet: .. To determine relationships between AAS sequences, a guide phylogeny tree was constructed using the neighbor-joining method in MacVector vers 12 DNA analysis software (MacVector Inc., Cary, North Carolina). ..

Construct:

Article Title: Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins)
Article Snippet: .. Relative abundance values were adjusted to account for contig size and total library reads using the following equation: e y = ( n y N x L 1x / n x N y L y ) × e x , where e x and e y represent normalized relative abundance levels of AAS transcript in libraries X and Y, N x and N y represent the total number of reads in libraries X and Y, n x and n y represent the number of reads related to the specific AAS transcript in libraries X and Y, and L x and L y represent the length of the contig related to the specific AAS transcript in libraries X and Y. Phylogeny and comparative sequence analysis among AAS sequences To determine relationships between AAS sequences, a guide phylogeny tree was constructed using the neighbor-joining method in MacVector vers 12 DNA analysis software (MacVector Inc., Cary, North Carolina). ..

Article Title: Bioinformatic analyses of male and female Amblyomma americanum tick expressed serine protease inhibitors (serpins)
Article Snippet: .. To determine relationships between AAS sequences, a guide phylogeny tree was constructed using the neighbor-joining method in MacVector vers 12 DNA analysis software (MacVector Inc., Cary, North Carolina). ..

Clone Assay:

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.

Polymerase Chain Reaction:

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.

DNA Sequencing:

Article Title: The discovery of multiple active mys-related LTR-retroelements within the Neotominae subfamily of cricetid rodents.
Article Snippet: Retrotransposon families in the rodent family Cricetidae have been understudied in contrast to Muridae, both taxa classified within the superfamily Muroidea.. Therefore, we carried out a study to advance our knowledge of the unique mys LTR-retroelement identified in Peromyscus leucopus, by incorporating intra-ORF PCR, quantitative dot blots, DNA and protein library screens, the generation of molecular phylogenies, and analyses of orthologous LTR-retroelement loci.. These analyses led to the discovery of three additional related families of LTR-retroelements, which include a 2900 bp full-length element of mys-related sequences (mysRS), an 8000 bp element containing the mys ORF1 sequence (mORF1) with ERVrelated sequences downstream in the reverse orientation, as well as an 1800 bp element primarily consisting of mys ORF2 (mORF2) related sequences flanked by LTRs.



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